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  5. TP08G04050.1

TP08G04050.1


Description : TraB family [Interproscan].


Gene families : OG_01_0000457 (OrthoFinder) Phylogenetic Tree(s): OG0000457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP08G04050.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
OT_04G01850.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_17G02570.1 No alias TraB family [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492438.1_9131 KAA8492438 TraB domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002816 TraB/PrgY/GumN_fam 409 485
No external refs found!