1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP04G07860.1

TP04G07860.1


Description : Adenylyl cyclase class-3/4/guanylyl cyclase; Orc1-like, AAA ATPase domain [Interproscan].


Gene families : OG_01_0000115 (OrthoFinder) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07860.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.80 tig00000254_g22535.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00001154.1 tig00001154_g7264.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001258.2 tig00001258_g7823.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020592.59 tig00020592_g11690.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021073.51 tig00021073_g18058.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021290.4 tig00021290_g19961.t1 No description available 0.02 OrthoFinder
PTI_02G01420.1 No alias Adenylyl cyclase class-3/4/guanylyl cyclase; Orc1-like,... 0.04 OrthoFinder
Sro368_g127930.1 Contig2761.g22232 Cyclase type 10 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009190 cyclic nucleotide biosynthetic process IEA Interproscan
BP GO:0035556 intracellular signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR041664 AAA_16 760 990
IPR001054 A/G_cyclase 590 740
IPR001054 A/G_cyclase 253 467
No external refs found!