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  5. Sro724_g193130.1

Sro724_g193130.1 (Contig824.g9143)


Aliases : Contig824.g9143

Description : Sodium channel voltage-gated type


Gene families : OG_01_0002906 (OrthoFinder) Phylogenetic Tree(s): OG0002906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro724_g193130.1
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
Sro115_g056820.1 Contig88.g948 Sodium channel voltage-gated type 0.03 OrthoFinder
Sro378_g130180.1 Contig2744.g22061 Sodium channel voltage-gated type 0.03 OrthoFinder
Sro37_g023360.1 Contig1425.g13152 Dependent L-type calcium channel subunit alpha 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 105 334
No external refs found!