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  5. Sro2718_g335420.1

Sro2718_g335420.1 (Contig1422.g13112)


Aliases : Contig1422.g13112

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2718_g335420.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Sro1067_g237390.1 Contig2309.g19054 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro159_g071820.1 Contig500.g6722 Extracellular solute-binding protein 0.03 OrthoFinder
Sro3494_g348610.1 Contig3168.g25076 Extracellular solute-binding protein 0.03 OrthoFinder
Sro474_g150170.2 No alias Hypothetical protein 0.02 OrthoFinder
Sro73_g040260.1 Contig3929.g30127 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 373 577
No external refs found!