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  5. Sro1222_g253810.1

Sro1222_g253810.1 (Contig1750.g15573)


Aliases : Contig1750.g15573

Description : PpGpp synthase/hydrolase RelA


Gene families : OG_01_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1222_g253810.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.320 4.320 (Uracil-5)-methyltransferase family; Adenylate kinase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR004095 TGS 750 809
IPR007685 RelA_SpoT 635 707
IPR007685 RelA_SpoT 520 565
IPR002912 ACT_dom 1130 1202
No external refs found!