Transcript_contig_54139 (54139)


Aliases : 54139

Description : Pyruvate kinase, C-terminal; Pyruvate kinase, barrel [Interproscan].


Gene families : OG_01_0000331 (OrthoFinder) Phylogenetic Tree(s): OG0000331_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54139
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Cz16g00040.t1 No alias Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.04 OrthoFinder
EOD19399 No alias Pyruvate kinase, barrel [Interproscan]. 0.01 OrthoFinder
PTI_08G04240.1 No alias Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.01 OrthoFinder
PTI_20G02500.1 No alias Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.01 OrthoFinder
PTI_20G02580.1 No alias Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.02 OrthoFinder
Sro184_g079830.1 Contig2216.g18386 Pyruvate kinase 0.02 OrthoFinder
Sro635_g179070.1 Contig3513.g27208 Pyruvate kinase 0.04 OrthoFinder
Sro94_g048890.1 Contig150.g1679 Pyruvate kinase 0.01 OrthoFinder
SymbC1.scaffold39.174 39.174 Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.01 OrthoFinder
TP04G05750.1 No alias Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.02 OrthoFinder
TP04G05760.1 No alias Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.02 OrthoFinder
Vocar.0028s0006.1 32895672 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.03 OrthoFinder
XM_002503055.1 MICPUN_82586, 82586 Cytosolic pyruvate kinase 0.01 OrthoFinder
XM_003055326.1 MicpuC2_49922, 49922 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.02 OrthoFinder
XM_003060807.1 MicpuC2_19660, 19660 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.01 OrthoFinder
lcl|BLLF01000387.1_cds_GFH11258.1_5735 HaLaN_06731, GFH11258 Pyruvate kinase 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34011.1_3016 PRW34011 Pyruvate kinase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496864.1_593 KAA8496864 Pyruvate kinase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0004743 pyruvate kinase activity IEA Interproscan
BP GO:0006096 glycolytic process IEA Interproscan
MF GO:0030955 potassium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR015793 Pyrv_Knase_brl 24 368
IPR015795 Pyrv_Knase_C 384 503
No external refs found!