lcl|LHPG02000012.1_cds_PRW45074.1_1733 (PRW45074)

Aliases : PRW45074

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Gene families : OG_01_0003408 (OrthoFinder) Phylogenetic Tree(s): OG0003408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000012.1_cds_PRW45074.1_1733
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
Cre08.g372950	30773984, IDS1	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder
Cz05g23010.t1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase...	0.02	OrthoFinder
OT_08G01200.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase...	0.05	OrthoFinder
Sro1648_g288440.1	Contig4608.g34386	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.03	OrthoFinder
TP05G04820.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase...	0.03	OrthoFinder
Vocar.0065s0012.1	32886826	4-hydroxy-3-methylbut-2-enyl diphosphate reductase...	0.04	OrthoFinder
XM_003058725.1	MicpuC2_26764, 26764	4-hydroxy-3-methylbut-2-enyl diphosphate reductase...	0.02	OrthoFinder
lcl\|BLLF01000402.1_cds_GFH11424.1_5901	HaLaN_06917, GFH11424	1-hydroxy-2-methyl-2-butenyl 4-diphosphate (HMBPP)...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEA	Interproscan
BP	GO:0050993	dimethylallyl diphosphate metabolic process	None	Extended
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEP	Enrichment
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEP	Enrichment
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Enrichment
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Enrichment
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006544	glycine metabolic process	IEP	Enrichment
BP	GO:0006546	glycine catabolic process	IEP	Enrichment
BP	GO:0006555	methionine metabolic process	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
BP	GO:0006817	phosphate ion transport	IEP	Enrichment
BP	GO:0006862	nucleotide transport	IEP	Enrichment
MF	GO:0008171	O-methyltransferase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Enrichment
BP	GO:0009063	cellular amino acid catabolic process	IEP	Enrichment
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Enrichment
BP	GO:0009069	serine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009071	serine family amino acid catabolic process	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
BP	GO:0010109	regulation of photosynthesis	IEP	Enrichment
BP	GO:0010207	photosystem II assembly	IEP	Enrichment
MF	GO:0010242	oxygen evolving activity	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Enrichment
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015297	antiporter activity	IEP	Enrichment
MF	GO:0015298	solute:cation antiporter activity	IEP	Enrichment
MF	GO:0015299	solute:proton antiporter activity	IEP	Enrichment
MF	GO:0015301	anion:anion antiporter activity	IEP	Enrichment
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Enrichment
BP	GO:0015748	organophosphate ester transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
BP	GO:0015994	chlorophyll metabolic process	IEP	Enrichment
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Enrichment
BP	GO:0016054	organic acid catabolic process	IEP	Enrichment
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Enrichment
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Enrichment
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016872	intramolecular lyase activity	IEP	Enrichment
BP	GO:0019725	cellular homeostasis	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Enrichment
BP	GO:0042549	photosystem II stabilization	IEP	Enrichment
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
BP	GO:0046148	pigment biosynthetic process	IEP	Enrichment
BP	GO:0046395	carboxylic acid catabolic process	IEP	Enrichment
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
MF	GO:0140323	solute:anion antiporter activity	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Enrichment
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003451	LytB/IspH	125	467

External Links

No external refs found!

lcl|LHPG02000012.1_cds_PRW45074.1_1733 (PRW45074)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation