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  5. lcl|LHPG02000005.1_cds_PRW58554.1_7753

lcl|LHPG02000005.1_cds_PRW58554.1_7753 (PRW58554)


Aliases : PRW58554

Description : Tubulin alpha chain


Gene families : OG_01_0000699 (OrthoFinder) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58554.1_7753
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000404.34 tig00000404_g397.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cz07g00160.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Cz11g05030.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Dusal.0907s00005.1 33189153 Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
EOD08306 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD12704 No alias Alpha-tubulin [Ensembl]. 0.01 OrthoFinder
EOD12836 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD15554 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD22056 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
EOD29196 No alias Alpha-tubulin [Ensembl]. 0.04 OrthoFinder
OT_12G01250.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Sro1718_g293350.1 Contig3856.g29683 Tubulin alpha chain (Fragment) 0.01 OrthoFinder
SymbC1.scaffold4845.1 4845.1 Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer... 0.03 OrthoFinder
SymbC1.scaffold7673.2 7673.2 Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer... 0.02 OrthoFinder
TP09G01530.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.01 OrthoFinder
Transcript_contig_58863 58863 Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007088 regulation of mitotic nuclear division IEP Enrichment
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Enrichment
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0031577 spindle checkpoint signaling IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0033046 negative regulation of sister chromatid segregation IEP Enrichment
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Enrichment
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0045839 negative regulation of mitotic nuclear division IEP Enrichment
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0045930 negative regulation of mitotic cell cycle IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051783 regulation of nuclear division IEP Enrichment
BP GO:0051784 negative regulation of nuclear division IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0051985 negative regulation of chromosome segregation IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071173 spindle assembly checkpoint signaling IEP Enrichment
BP GO:0071174 mitotic spindle checkpoint signaling IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
BP GO:1905819 negative regulation of chromosome separation IEP Enrichment
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!