1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre17.g743847

Cre17.g743847 (30782211)


Aliases : 30782211

No description available


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g743847
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cz04g25190.t1 No alias U box domain; RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Dusal.0073s00017.1 33194600 WD40 repeat; U box domain [Interproscan]. 0.03 OrthoFinder
EOD12358 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD13199 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD19380 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD35735 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD39226 No alias U box domain [Interproscan]. 0.02 OrthoFinder
Sro305_g112760.1 Contig560.g7117 U-box domain-containing protein 0.01 OrthoFinder
SymbC1.scaffold1415.1 1415.1 Armadillo; U box domain [Interproscan]. 0.01 OrthoFinder
TP06G01910.1 No alias U box domain [Interproscan]. 0.02 OrthoFinder
TP14G00860.1 No alias U box domain; Ankyrin repeats (many copies) [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54040 54040 U box domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0389.1 32897391 Ankyrin repeat-containing domain; U box domain [Interproscan]. 0.02 OrthoFinder
Vocar.0048s0047.1 32893667 TPR repeat; U box domain [Interproscan]. 0.02 OrthoFinder
Vocar.0059s0023.1 32893612 U box domain [Interproscan]. 0.02 OrthoFinder
XM_002504093.1 MICPUN_61042, 61042 U box domain [Interproscan]. 0.02 OrthoFinder
XM_003056755.1 MicpuC2_56233, 56233 WD40 repeat protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 115 181
IPR000504 RRM_dom 19 91
IPR003613 Ubox_domain 334 392
No external refs found!