Cre11.g467678 (30775629, COP6)


Aliases : 30775629, COP6

Description : Histidine kinase 5 OS=Arabidopsis thaliana


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g467678
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00000093.27 tig00000093_g3462.t1 Ethylene receptor 1 OS=Brassica oleracea 0.02 OrthoFinder
Cpa|evm.model.tig00000615.4 tig00000615_g2530.t1 Probable histidine kinase 1 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00020610.13 tig00020610_g11951.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz12g05190.t1 No alias Archaeal/bacterial/fungal rhodopsins; Sterile alpha... 0.02 OrthoFinder
Dusal.0121s00015.1 33195087 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.03 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.03 OrthoFinder
Dusal.0212s00007.1 33202592 Hypothetical protein 0.03 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.02 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.03 OrthoFinder
Sro25_g017380.1 Contig1417.g13077 Virulence factors putative positive transcription regulator BvgA 0.03 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.03 OrthoFinder
Vocar.0003s0423.1 32889392 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.02 OrthoFinder
Vocar.0069s0008.1 32896762 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.05 OrthoFinder
XM_003062956.1 MicpuC2_21996, 21996 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0009190 cyclic nucleotide biosynthetic process IEA Interproscan
BP GO:0035556 intracellular signal transduction IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 457 566
IPR003661 HisK_dim/P 343 409
IPR001789 Sig_transdc_resp-reg_receiver 1158 1272
IPR001054 A/G_cyclase 1322 1505
IPR001425 Arc/bac/fun_rhodopsins 161 294
No external refs found!