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Aliases : 30773892
Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase
Gene families : OG_01_0001374 (OrthoFinder) Phylogenetic Tree(s): OG0001374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre08.g358538 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz12g10170.t1 | No alias | Lycopene cyclase protein [Interproscan]. | 0.02 | OrthoFinder | |
| EOD39523 | No alias | Lycopene cyclase protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_14G00760.1 | No alias | Lycopene cyclase protein; Chlorophyll A-B binding... | 0.04 | OrthoFinder | |
| Sro1061_g236780.1 | Contig3773.g28961 | Capsanthin/capsorubin synthase, chromoplastic | 0.01 | OrthoFinder | |
| Sro1391_g268770.1 | Contig735.g8426 | Capsanthin/capsorubin synthase, chromoplastic | 0.02 | OrthoFinder | |
| Sro1810_g299160.1 | Contig2202.g18323 | Capsanthin/capsorubin synthase, chromoplastic | 0.01 | OrthoFinder | |
| Vocar.0002s0179.1 | 32891009 | Lycopene cyclase protein [Interproscan]. | 0.06 | OrthoFinder | |
| XM_002505562.1 | MICPUN_63812, 63812 | Lycopene beta cyclase | 0.05 | OrthoFinder | |
| lcl|BLLF01000275.1_cds_GFH09920.1_4397 | HaLaN_05151, GFH09920 | Lycopene beta cyclase | 0.03 | OrthoFinder | |
| lcl|BLLF01003907.1_cds_GFH28508.1_22985 | HaLaN_27012, GFH28508 | Chloroplast lycopene epsilon-cyclase | 0.04 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56341.1_10296 | PRW56341 | Lycopene epsilon cyclase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004325 | ferrochelatase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |