Sequence Description Alias PCC hrr Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30783180 0.846167645653 2 Cre02.g095092 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PSY phytoene synthase 30785417, PSY1 0.834040046222 2 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 30784500 0.811160566476 10 Cre16.g690350 30777415 0.788113898623 4 Cre02.g081400 Amino acid metabolism.degradation.branched-chain amino acid.BCAT branched-chain aminotransferase 30786372, BCA1 0.780199414114 8 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 30782442, FHL2 0.778824273251 9 Cre07.g339750 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.ferrochelatase 30774410, HEM2 0.774564080615 14 Cre08.g369150 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30773787 0.768557886025 25 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 30788730 0.753752591978 9 Cre10.g429800 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30790836, COQ8 0.749474256924 18 Cre17.g734612 ABC transporter C family member 14 OS=Arabidopsis thaliana 30781956, MRP2 0.742561996603 11 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 30791981, FHL1 0.741880742593 17 Cre09.g402500 Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit a 30781514, ATPvA2 0.735314584003 27 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component 30784416 0.730511653257 14 Cre06.g281800 30779555 0.72860146582 15 Cre12.g519300 30793372, TEF9 0.727086459152 21 Cre10.g439000 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 30790389 0.724925551929 29 Cre06.g267600 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-e lycopene epsilon cyclase 30779398, LEC1 0.723252316599 18 Cre09.g393950 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana 30780473 0.716981207795 55 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30778123, ELI1 0.716289844713 37 Cre13.g564900 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter 30784450, MRP3 0.709253676513 22 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 30792828 0.707481574535 24 Cre08.g372250 ABC transporter F family member 5 OS=Arabidopsis thaliana 30774146 0.70714845063 52 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 30776413 0.707059689208 40 Cre04.g221550 30791030 0.705669231676 27 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 30780099 0.70547549655 28 Cre03.g145567 30786601, CGL18 0.705181626603 29 Cre04.g225050 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component 30791185 0.698503929712 30 Cre09.g397250 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta-7/delta-9 fatty acid desaturase 30780967 0.694544356719 31 Cre01.g038600 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase 30789324, FAD7 0.693065152999 35 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase 30791351 0.692845406977 33 Cre04.g215400 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30791004, AKC3 0.692323056483 34 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component 30783113 0.69212723514 35 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 30784280 0.689439312683 36 Cre08.g360801 30773927 0.689402958578 37 Cre03.g158500 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30787514 0.688156784925 62 Cre08.g358540 30773410 0.683805238444 39 Cre06.g286350 30778873 0.683293290289 80 Cre01.g037700 Acyl-lipid (7-3)-desaturase, chloroplastic OS=Chlamydomonas reinhardtii 30788905, FAD3 0.683215474831 52 Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease 30790201, SPP1 0.676380103427 43 Cre16.g664350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) 30776947 0.676344232241 44 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 30784232, THF1 0.675980090061 45 Cre16.g673001 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase 30777614 0.673449232116 46 Cre13.g570350 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30784007, AKC4 0.671599406419 94 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 30780830 0.670765602415 72 Cre01.g011100 Secondary metabolism.terpenoids.terpenoid synthesis.triterpenoid synthase 30789592 0.670443737513 49 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana 30782523 0.664706147398 51 Cre14.g620350 Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Oryza sativa subsp. japonica 30776207 0.663061062818 65 Cre09.g407200 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 30780595 0.658224779398 55 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 30780556, TEF5 0.656281293691 56 Cre08.g381516 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 30773746 0.655202466518 58 Cre06.g281250 30779403, CFA1 0.652938157702 59 Cre03.g206929 Protein modification.peptide maturation.plastid.EGY protease 30788225, RSE4 0.652340847553 60 Cre13.g581850 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30784319 0.65138714961 62 Cre17.g729800 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30781893 0.641033454222 66 Cre02.g113550 30785672 0.633021829484 96 Cre08.g379550 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter 30773714 0.630712242128 78 Cre12.g494550 30792018, RNP10 0.62775338517 83 Cre07.g316050 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 30775379, CDJ2 0.627457979008 94 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30773689 0.626839227058 85 Cre06.g310500 External stimuli response.light.UV-B light.UV-B signal transduction transcriptional regulator 30778677 0.626005118534 86 Cre08.g360850 30773941 0.621184346877 91 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 30783939 0.618785136444 93 Cre09.g393900 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 213.2) & Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica 30780989 0.616613330497 98 Cre02.g142146 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 30785153 0.615521464248 99 Cre17.g712400 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein 30782380 0.615351986127 100