TP17G00460.1

Description : ABC transporter-like; ABC-2 type transporter [Interproscan].

Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP17G00460.1
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
lcl\|LHPG02000002.1_cds_PRW60703.1_4489	PRW60703	Pleiotropic drug resistance 1	0.01	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60778.1_4475	PRW60778	ATP-binding cassette transporter	0.01	OrthoFinder
lcl\|LHPG02000016.1_cds_PRW33630.1_3378	PRW33630	Pleiotropic drug resistance 1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Enrichment
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Enrichment
BP	GO:0010033	response to organic substance	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
BP	GO:0015696	ammonium transport	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
BP	GO:0019236	response to pheromone	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	12	168
IPR013525	ABC_2_trans	945	1151
IPR013525	ABC_2_trans	322	531
IPR003439	ABC_transporter-like_ATP-bd	662	804

External Links

No external refs found!