TP12G00130.1


Description : Cobalamin (vitamin B12)-binding module, cap domain; Homocysteine-binding domain; Vitamin B12-dependent methionine synthase, activation domain; Cobalamin (vitamin B12)-binding domain; Pterin-binding domain [Interproscan].


Gene families : OG_01_0001464 (OrthoFinder) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP12G00130.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cre06.g250902 30779395 Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder
OT_03G04720.1 No alias Cobalamin (vitamin B12)-binding domain; Pterin-binding... 0.01 OrthoFinder
PTI_23G02000.1 No alias Pterin-binding domain; Cobalamin (vitamin B12)-binding... 0.03 OrthoFinder
Sro803_g204810.1 Contig386.g5195 Probable methionine synthase 0.08 OrthoFinder
SymbC1.scaffold19406.2 19406.2 Cobalamin (vitamin B12)-binding module, cap domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008705 methionine synthase activity IEA Interproscan
BP GO:0009086 methionine biosynthetic process IEA Interproscan
MF GO:0031419 cobalamin binding IEA Interproscan
BP GO:0042558 pteridine-containing compound metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004223 VitB12-dep_Met_synth_activ_dom 954 1232
IPR006158 Cobalamin-bd 760 854
IPR003759 Cbl-bd_cap 655 727
IPR003726 HCY_dom 1 306
IPR000489 Pterin-binding_dom 349 588
No external refs found!