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  5. TP09G03270.1

TP09G03270.1


Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000325 (OrthoFinder) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP09G03270.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000857.17 tig00000857_g4940.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Dusal.0036s00024.1 33190420 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Dusal.0084s00030.1 33201452 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
PTI_16G02670.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.05 OrthoFinder
Transcript_contig_56194 56194 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
XM_002502312.1 MICPUN_58287, 58287 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003061531.1 MicpuC2_28771, 28771 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499548.1_8501 KAA8499548 ATP-binding cassette sub-family B member 6, mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 350 499
IPR011527 ABC1_TM_dom 3 284
No external refs found!