1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP08G02770.1

TP08G02770.1


Description : Translation initiation factor 3 complex subunit L [Interproscan].


Gene families : OG_01_0003886 (OrthoFinder) Phylogenetic Tree(s): OG0003886_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP08G02770.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.15 tig00022075_g23578.t1 Protein biosynthesis.translation... 0.03 OrthoFinder
Cre17.g697450 30782733 Protein biosynthesis.translation... 0.03 OrthoFinder
EOD20928 No alias Translation initiation factor 3 complex subunit L [Interproscan]. 0.02 OrthoFinder
OT_11G03270.1 No alias Translation initiation factor 3 complex subunit L [Interproscan]. 0.03 OrthoFinder
PTI_05G03420.1 No alias Translation initiation factor 3 complex subunit L [Interproscan]. 0.06 OrthoFinder
Sro162_g072770.1 Contig2670.g21613 Factor 3 subunit L 0.04 OrthoFinder
Transcript_contig_58062 58062 Translation initiation factor 3 complex subunit L [Interproscan]. 0.01 OrthoFinder
XM_002509123.1 MICPUN_107179, 107179 Translation initiation factor 3 complex subunit L [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000223.1_cds_GFH09297.1_3774 HaLaN_04407, GFH09297 Eukaryotic translation initiation factor 3 subunit L 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58820.1_6998 PRW58820 Eukaryotic translation initiation factor 3 subunit L-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR019382 eIF3l 91 497
No external refs found!