1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP07G06760.1

TP07G06760.1


Description : Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain [Interproscan].


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G06760.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cre16.g695100 30776858 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder
Cz17g14150.t1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.02 OrthoFinder
Dusal.0407s00006.1 33197900 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.02 OrthoFinder
EOD04335 No alias Long-chain specific acyl-CoA dehydrogenase [Ensembl]. 0.02 OrthoFinder
PTI_03G06290.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.03 OrthoFinder
Sro1037_g234200.1 Contig2347.g19309 Short-chain specific acyl-CoA dehydrogenase, mitochondrial 0.16 OrthoFinder
Vocar.0012s0263.1 32894907 Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA... 0.03 OrthoFinder
lcl|BLLF01000025.1_cds_GFH06166.1_643 HaLaN_00751, GFH06166 Ig-like domain-containing protein 0.01 OrthoFinder
lcl|BLLF01003461.1_cds_GFH27402.1_21879 HaLaN_25715, GFH27402 Ig-like domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR009075 AcylCo_DH/oxidase_C 222 368
IPR013786 AcylCoA_DH/ox_N 2 100
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 115 210
No external refs found!