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  5. TP06G06120.1

TP06G06120.1


Description : Domain of unknown function DUF1605; Helicase, C-terminal; DEAD/DEAH box helicase domain; Helicase-associated domain [Interproscan].


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G06120.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz02g22140.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.03 OrthoFinder
Cz12g28100.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.03 OrthoFinder
Cz16g14170.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.05 OrthoFinder
Dusal.0244s00011.1 33186504 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
EOD26794 No alias Helicase, C-terminal; Domain of unknown function... 0.01 OrthoFinder
EOD28324 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
Sro54_g031680.1 Contig2430.g19856 Splicing factor ATP-dependent RNA helicase 0.02 OrthoFinder
Sro657_g182550.1 Contig301.g3975 Splicing factor ATP-dependent RNA helicase-like protein cdc28 0.02 OrthoFinder
Transcript_contig_67459 67459 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Transcript_contig_89480 89480 Helicase-associated domain; Helicase, C-terminal; Domain... 0.01 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33665.1_3289 PRW33665 Putative ATP-dependent RNA helicase DHX35 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 434 518
IPR001650 Helicase_C 229 371
IPR011709 DUF1605 606 697
IPR011545 DEAD/DEAH_box_helicase_dom 21 184
No external refs found!