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  5. TP06G05970.1

TP06G05970.1


Description : UPF0176, acylphosphatase-like domain; Rhodanese-like domain; Rhodanase, C-terminal [Interproscan].


Gene families : OG_01_0000348 (OrthoFinder) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G05970.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
EOD39683 No alias UPF0176, acylphosphatase-like domain; Rhodanase,... 0.02 OrthoFinder
OT_14G02750.1 No alias Rhodanase, C-terminal; UPF0176, acylphosphatase-like... 0.01 OrthoFinder
PTI_05G02720.1 No alias UPF0176, acylphosphatase-like domain [Interproscan]. 0.02 OrthoFinder
Sro516_g158450.1 Contig3306.g25909 UPF0176 protein 0.04 OrthoFinder
SymbC1.scaffold786.7 786.7 Rhodanase, C-terminal; UPF0176, acylphosphatase-like... 0.02 OrthoFinder
XM_002506663.1 MICPUN_89019, 89019 Rhodanese-like domain [Interproscan]. 0.02 OrthoFinder
XM_003055045.1 MicpuC2_50491, 50491 Rhodanese-like domain; Rhodanase, C-terminal; UPF0176,... 0.02 OrthoFinder
XM_003058427.1 MicpuC2_58038, 58038 Rhodanese-like domain; Rhodanase, C-terminal; UPF0176,... 0.02 OrthoFinder
XM_003062322.1 MicpuC2_52148, 52148 Rhodanese-like domain; Rhodanase, C-terminal; UPF0176,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022111 Rhodanese_C 270 347
IPR040503 TRHO_N 32 127
IPR001763 Rhodanese-like_dom 151 260
No external refs found!