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  5. TP05G05200.1

TP05G05200.1


Description : EF-hand domain; Cyclic nucleotide-binding domain; Ion transport domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G05200.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000851.5 tig00000851_g4889.t1 Putative cyclic nucleotide-gated ion channel 8... 0.02 OrthoFinder
Cpa|evm.model.tig00001127.26 tig00001127_g7159.t1 Potassium channel KAT1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00021319.15 tig00021319_g20210.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021348.58 tig00021348_g20561.t1 Putative cyclic nucleotide-gated ion channel 8... 0.02 OrthoFinder
Cre17.g706900 30782036, CNG3 Solute transport.channels.VIC superfamily.voltage-gated... 0.01 OrthoFinder
Dusal.0329s00009.1 33198134 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
SymbC1.scaffold3638.5 3638.5 Potassium channel domain; Cyclic nucleotide-binding... 0.01 OrthoFinder
SymbC1.scaffold5511.5 5511.5 Cyclic nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold84.10 84.10 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
TP03G02790.1 No alias Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
XM_002500154.1 MICPUN_98786, 98786 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000135.1_cds_GFH08070.1_2547 HaLaN_02975, GFH08070 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10809.1_5286 HaLaN_06192, GFH10809 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10810.1_5287 HaLaN_06193, GFH10810 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001221.1_cds_GFH17913.1_12390 HaLaN_14637, GFH17913 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 321 462
IPR002048 EF_hand_dom 201 271
IPR000595 cNMP-bd_dom 689 770
No external refs found!