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  5. TP04G05700.1

TP04G05700.1


Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G05700.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734612 30781956, MRP2 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0852s00004.1 33185428 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Dusal.2478s00001.1 33194889 ABC transporter type 1, transmembrane domain [Interproscan]. 0.03 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
Transcript_contig_17 17 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Transcript_contig_78893 78893 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
XM_003058166.1 MicpuC2_15932, 15932 ATP-binding cassette superfamily 0.04 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56046.1_9960 PRW56046 Multidrug resistance-associated 1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 264 397
IPR011527 ABC1_TM_dom 554 819
IPR011527 ABC1_TM_dom 3 205
IPR003439 ABC_transporter-like_ATP-bd 898 1048
No external refs found!