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  5. TP03G09080.1

TP03G09080.1


Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G09080.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.4 tig00000741_g3824.t1 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.1005s00005.1 33195266 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
PTI_03G01030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Sro1234_g254930.1 Contig2459.g20128 Probable microcin-H47 secretion/processing ATP-binding... 0.02 OrthoFinder
Sro84_g044670.1 Contig220.g2600 Leptomycin B resistance protein pmd1 0.03 OrthoFinder
XM_002505595.1 MICPUN_87670, 87670 ATP-binding cassette superfamily 0.03 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12386.1_6863 HaLaN_08063, GFH12386 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 838 987
IPR011527 ABC1_TM_dom 148 395
IPR011527 ABC1_TM_dom 1117 1414
IPR003439 ABC_transporter-like_ATP-bd 539 699
No external refs found!