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  5. TP03G05080.1

TP03G05080.1


Description : S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, N-terminal; S-adenosylmethionine synthetase, central domain [Interproscan].


Gene families : OG_01_0001928 (OrthoFinder) Phylogenetic Tree(s): OG0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G05080.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001530.4 tig00001530_g9266.t1 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.02 OrthoFinder
Cre06.g250200 30779081 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.05 OrthoFinder
Cz15g18200.t1 No alias S-adenosylmethionine synthetase, C-terminal;... 0.05 OrthoFinder
EOD07277 No alias Methionine S-adenosyl transferase [Ensembl]. 0.03 OrthoFinder
EOD33227 No alias S-adenosylmethionine synthetase [Ensembl]. 0.02 OrthoFinder
OT_15G01020.1 No alias S-adenosylmethionine synthetase, central domain;... 0.03 OrthoFinder
PTI_00G03580.1 No alias S-adenosylmethionine synthetase, N-terminal;... 0.04 OrthoFinder
Sro140_g065420.1 Contig1537.g13958 S-adenosylmethionine synthase 0.09 OrthoFinder
Sro364_g127170.1 Contig2146.g18068 S-adenosylmethionine synthase 0.03 OrthoFinder
SymbC1.scaffold7218.2 7218.2 S-adenosylmethionine synthetase, N-terminal;... 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57411.1_9272 PRW57411 S-adenosylmethionine synthetase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
BP GO:0006556 S-adenosylmethionine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022628 S-AdoMet_synt_N 7 112
IPR022629 S-AdoMet_synt_central 127 284
IPR022630 S-AdoMet_synt_C 286 421
No external refs found!