1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP03G03350.1

TP03G03350.1


Description : Major facilitator superfamily [Interproscan].


Gene families : OG_01_0000133 (OrthoFinder) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G03350.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.4 tig00000571_g2155.t1 High-affinity nitrate transporter 2.3 OS=Oryza sativa... 0.02 OrthoFinder
Cpa|evm.model.tig00001177.11 tig00001177_g7366.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder
Cpa|evm.model.tig00001177.16 tig00001177_g7371.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.04 OrthoFinder
Cre09.g396000 30781439, NRT2.3 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder
Cre09.g410800 30780896, NRT2.2 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.04 OrthoFinder
Cre09.g410850 30780328 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder
Cz08g30210.t1 No alias Hypothetical protein 0.02 OrthoFinder
Dusal.0123s00024.1 33188391 Hypothetical protein 0.01 OrthoFinder
EOD15007 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD39011 No alias Putative nitrate transporter [Ensembl]. 0.02 OrthoFinder
OT_10G00930.1 No alias Major facilitator superfamily [Interproscan]. 0.03 OrthoFinder
PTI_02G03210.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
PTI_04G01640.1 No alias Major facilitator superfamily [Interproscan]. 0.07 OrthoFinder
PTI_10G00040.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
PTI_25G00690.1 No alias Major facilitator superfamily [Interproscan]. 0.06 OrthoFinder
Sro1080_g238980.1 Contig43.g297 Affinity nitrate transporter 2.3 0.01 OrthoFinder
Sro109_g054430.1 Contig4753.g35225 Affinity nitrate transporter 2 0.02 OrthoFinder
Sro121_g058950.1 Contig1619.g14649 Affinity nitrate transporter 2 0.03 OrthoFinder
Sro121_g058960.1 Contig1619.g14650 Affinity nitrate transporter 2 0.02 OrthoFinder
Sro1320_g262360.1 Contig4115.g31415 Affinity nitrate transporter 2 0.02 OrthoFinder
Sro1464_g274890.1 Contig485.g6548 Affinity nitrate transporter 2 0.05 OrthoFinder
Sro2046_g312490.1 Contig3582.g27685 Affinity nitrate transporter 2 0.04 OrthoFinder
Sro20_g014200.1 Contig2954.g23450 Affinity nitrate transporter 2 0.02 OrthoFinder
Sro4_g003070.1 Contig3815.g29225 Affinity nitrate transporter 2 0.01 OrthoFinder
Transcript_contig_80112 80112 Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
Transcript_contig_80192 80192 Hypothetical protein 0.02 OrthoFinder
XM_002507068.1 MICPUN_104706, 104706 Major facilitator superfamily 0.02 OrthoFinder
XM_003057896.1 MicpuC2_49583, 49583 Major facilitator superfamily (NRT2.1) 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498336.1_7289 KAA8498336 High affinity nitrate transporter 2.5 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498340.1_7293 KAA8498340 High affinity nitrate transporter 2.5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR011701 MFS 50 405
No external refs found!