TP02G09580.1

Description : Ribosome biogenesis protein Nop16 [Interproscan].

Gene families : OG_01_0003168 (OrthoFinder) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP02G09580.1
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
EOD03811	No alias	Ribosome biogenesis protein Nop16 [Interproscan].	0.03	OrthoFinder
EOD28436	No alias	Ribosome biogenesis protein Nop16 [Interproscan].	0.03	OrthoFinder
Sro1032_g233580.1	Contig2177.g18186	Ribosome biogenesis protein Nop16 [Interproscan].	0.04	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW59920.1_6303	PRW59920	Nucleolar 16	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
CC	GO:0005730	nucleolus	IEP	Enrichment
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
BP	GO:0030490	maturation of SSU-rRNA	IEP	Enrichment
CC	GO:0030684	preribosome	IEP	Enrichment
CC	GO:0030686	90S preribosome	IEP	Enrichment
CC	GO:0030688	preribosome, small subunit precursor	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019002	Ribosome_biogenesis_Nop16	68	118

External Links

No external refs found!