Sro920_g220300.1 (Contig2508.g20530)


Aliases : Contig2508.g20530

Description : Hypothetical protein


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro920_g220300.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Sro105_g053110.1 Contig544.g7000 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1103_g241671.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1283_g259100.1 Contig1308.g12123 Hypothetical protein 0.02 OrthoFinder
Sro156_g070890.1 Contig473.g6427 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1664_g289480.1 Contig291.g3803 Hypothetical protein 0.04 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.04 OrthoFinder
Sro200_g084740.1 Contig201.g2365 Hypothetical protein 0.03 OrthoFinder
Sro240_g096170.1 Contig3315.g26015 Hypothetical protein 0.03 OrthoFinder
Sro241_g096360.1 Contig4317.g32554 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro2804_g337440.1 Contig2399.g19647 Hypothetical protein 0.03 OrthoFinder
Sro2929_g340410.1 Contig3350.g26215 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro489_g153320.1 Contig402.g5441 Hypothetical protein 0.04 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro542_g163390.1 Contig390.g5308 Hypothetical protein 0.05 OrthoFinder
Sro582_g170430.1 Contig2996.g23799 Hypothetical protein 0.03 OrthoFinder
Sro697_g189120.1 Contig3345.g26211 Hypothetical protein 0.03 OrthoFinder
Sro74_g040870.1 Contig4700.g34949 Hypothetical protein 0.03 OrthoFinder
Sro796_g203650.1 Contig2034.g17463 Hypothetical protein 0.02 OrthoFinder
Sro85_g045380.1 Contig4580.g34215 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro94_g049130.1 Contig150.g1703 Hypothetical protein 0.03 OrthoFinder
Sro98_g050560.1 Contig3362.g26348 Hypothetical protein 0.07 OrthoFinder
Sro98_g050570.1 Contig3362.g26349 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!