Sro87_g045920.1 (Contig2014.g17200)

Aliases : Contig2014.g17200

Description : Receptor ionotropic, NMDA 1

Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro87_g045920.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241960.1 Contig673.g7891 Receptor ionotropic, NMDA 1 0.04 OrthoFinder
Sro1106_g241980.1 Contig673.g7893 Receptor ionotropic, NMDA 1 0.05 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.04 OrthoFinder
Sro206_g086490.1 Contig4750.g35186 Ionotropic glutamate receptor [Interproscan]. 0.02 OrthoFinder
Sro2288_g322060.1 Contig4716.g35057 Hypothetical protein 0.05 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.04 OrthoFinder
Sro62_g035330.1 Contig2718.g21914 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro833_g208600.1 Contig120.g1366 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 138 436
No external refs found!