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  5. Sro868_g213270.1

Sro868_g213270.1 (Contig2961.g23529)


Aliases : Contig2961.g23529

Description : Malate synthase 1, glyoxysomal


Gene families : OG_01_0004035 (OrthoFinder) Phylogenetic Tree(s): OG0004035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro868_g213270.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cre03.g144807 30786652, MAS1 Lipid metabolism.lipid degradation.fatty acid... 0.04 OrthoFinder
Cz14g25060.t1 No alias Malate synthase [Interproscan]. 0.06 OrthoFinder
PTI_08G01880.1 No alias Malate synthase [Interproscan]. 0.09 OrthoFinder
TP06G04590.1 No alias Malate synthase [Interproscan]. 0.18 OrthoFinder
Vocar.0014s0003.1 32888535 Malate synthase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002118.1_cds_GFH22763.1_17240 HaLaN_20275, GFH22763 Malate synthase 0.01 OrthoFinder
lcl|BLLF01002535.1_cds_GFH24432.1_18909 HaLaN_22228, GFH24432 Malate synthase 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60559.1_4125 PRW60559 Malate synthase A isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEA Interproscan
BP GO:0006097 glyoxylate cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001465 Malate_synthase 14 535
No external refs found!