Sro803_g204830.1 (Contig386.g5197)


Aliases : Contig386.g5197

Description : Probable methionine synthase


Gene families : OG_01_0001464 (OrthoFinder) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro803_g204830.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cz15g06080.t1 No alias Cobalamin (vitamin B12)-binding module, cap domain;... 0.01 OrthoFinder
OT_03G04720.1 No alias Cobalamin (vitamin B12)-binding domain; Pterin-binding... 0.01 OrthoFinder
SymbC1.scaffold4.215 4.215 Pterin-binding domain; Nitrite/sulphite reductase 4Fe-4S... 0.04 OrthoFinder
Vocar.0006s0021.1 32894136 Vitamin B12-dependent methionine synthase, activation... 0.01 OrthoFinder
XM_003055414.1 MicpuC2_45154, 45154 Pterin-binding domain; Cobalamin (vitamin B12)-binding... 0.02 OrthoFinder
lcl|VRMN01000025.1_cds_KAA8490491.1_2853 KAA8490491 Methionine synthase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008705 methionine synthase activity IEA Interproscan
BP GO:0009086 methionine biosynthetic process IEA Interproscan
MF GO:0031419 cobalamin binding IEA Interproscan
BP GO:0042558 pteridine-containing compound metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP Enrichment
CC GO:0031207 Sec62/Sec63 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR004223 VitB12-dep_Met_synth_activ_dom 633 910
IPR006158 Cobalamin-bd 439 533
IPR000489 Pterin-binding_dom 26 265
IPR003759 Cbl-bd_cap 334 406
No external refs found!