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  5. Sro616_g175920.1

Sro616_g175920.1 (Contig2621.g21284)


Aliases : Contig2621.g21284

Description : Trafficking protein particle complex


Gene families : OG_01_0002378 (OrthoFinder) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro616_g175920.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre01.g024400 30788567, TRS85 Vesicle trafficking.target membrane tethering.TRAPP... 0.02 OrthoFinder
Cz07g27240.t1 No alias TRAPP II complex, Trs120; TRAPP III complex, Trs85... 0.02 OrthoFinder
EOD18187 No alias Trafficking protein particle complex 8 [Ensembl]. 0.03 OrthoFinder
PTI_21G02570.1 No alias Non-structural maintenance of chromosome element 4,... 0.09 OrthoFinder
Vocar.0007s0377.1 32888118 TRAPP III complex, Trs85 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491491.1_6301 KAA8491491 TRAPP III complex, Trs85 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR024420 TRAPP_III_complex_Trs85 339 630
No external refs found!