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  5. Sro578_g169850.1

Sro578_g169850.1 (Contig83.g894)


Aliases : Contig83.g894

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro578_g169850.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.07 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.06 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.04 OrthoFinder
Sro1468_g275210.1 Contig3834.g29487 Leucine Rich Repeat 0.03 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.04 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.04 OrthoFinder
Sro2273_g321510.1 Contig1841.g16144 Leucine Rich Repeat 0.08 OrthoFinder
Sro242_g096620.1 Contig554.g7080 Leucine Rich Repeat 0.06 OrthoFinder
Sro24_g016630.1 Contig40.g273 Leucine Rich Repeat 0.04 OrthoFinder
Sro265_g102830.1 Contig1806.g15913 Leucine rich repeat 0.04 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.04 OrthoFinder
Sro283_g107810.1 Contig4255.g32212 Leucine Rich Repeat 0.04 OrthoFinder
Sro302_g112200.1 Contig378.g5078 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro3045_g342740.1 Contig2560.g20802 Leucine Rich Repeat 0.03 OrthoFinder
Sro321_g116720.1 Contig56.g428 Leucine Rich Repeat 0.04 OrthoFinder
Sro32_g020820.1 Contig3715.g28555 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.04 OrthoFinder
Sro343_g122030.1 Contig2616.g21254 Leucine Rich Repeat 0.02 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro449_g145300.1 Contig3482.g27000 STYKc 0.05 OrthoFinder
Sro449_g145320.1 Contig3482.g27002 Leucine Rich Repeat 0.05 OrthoFinder
Sro449_g145350.1 Contig3482.g27005 Leucine rich repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g030940.1 Contig3190.g25177 Leucine Rich Repeat 0.03 OrthoFinder
Sro558_g166260.1 Contig3624.g28024 Leucine Rich Repeat 0.05 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.02 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.04 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.04 OrthoFinder
Sro755_g197630.1 Contig3465.g26898 Leucine Rich Repeat 0.02 OrthoFinder
Sro837_g209110.1 Contig405.g5504 Leucine Rich Repeat 0.04 OrthoFinder
Sro86_g045610.1 Contig2999.g23839 Leucine Rich Repeat 0.03 OrthoFinder
Sro970_g226320.1 Contig1965.g16828 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!