Sro548_g164350.1 (Contig1714.g15315)

Aliases : Contig1714.g15315

Description : Sensor protein kinase WalK (Fragment)

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro548_g164350.1
Cluster	HCCA: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000042.236	tig00000042_g15634.t1	Probable histidine kinase 3 OS=Oryza sativa subsp. indica	0.01	OrthoFinder
Cpa\|evm.model.tig00000190.17	tig00000190_g13838.t1	Probable histidine kinase 3 OS=Oryza sativa subsp. indica	0.02	OrthoFinder
Cpa\|evm.model.tig00021682.12	tig00021682_g23102.t1	No description available	0.02	OrthoFinder
EOD04652	No alias	Putative two component response regulator [Ensembl].	0.02	OrthoFinder
Sro156_g070980.1	Contig473.g6436	Sensor protein kinase WalK (Fragment)	0.04	OrthoFinder
Sro1908_g304730.1	Contig1938.g16673	Peroxide stress-activated histidine kinase mak2	0.04	OrthoFinder
Sro20_g014160.1	Contig2954.g23446	Peroxide stress-activated histidine kinase mak2	0.07	OrthoFinder
Sro287_g108630.1	Contig252.g3104	Sensor protein kinase WalK (Fragment)	0.04	OrthoFinder
Sro28_g018500.1	Contig404.g5459	Sensor protein kinase WalK (Fragment)	0.05	OrthoFinder
Sro351_g124000.1	Contig4381.g32954	Respiration control sensor protein ArcB	0.07	OrthoFinder
Sro369_g128120.1	Contig1690.g15135	Hybrid signal transduction histidine kinase J	0.06	OrthoFinder
Sro419_g139190.1	Contig4415.g33180	Sensor kinase/phosphatase LuxQ	0.03	OrthoFinder
Sro419_g139200.1	Contig4415.g33181	Histidine kinase	0.03	OrthoFinder
Sro431_g141430.1	Contig2042.g17546	Histidine kinase	0.07	OrthoFinder
Sro433_g141880.1	Contig4540.g33950	Sensor kinase/phosphatase LuxQ	0.02	OrthoFinder
Sro508_g156640.1	Contig2824.g22619	Hybrid signal transduction histidine kinase K	0.03	OrthoFinder
Sro728_g193740.1	Contig1495.g13658	Hybrid signal transduction histidine kinase	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009117	nucleotide metabolic process	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003661	HisK_dim/P	346	414
IPR003594	HATPase_C	464	578
IPR001789	Sig_transdc_resp-reg_receiver	616	733
IPR000014	PAS	203	246

External Links

No external refs found!

Sro548_g164350.1 (Contig1714.g15315)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation