1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro473_g150070.1

Sro473_g150070.1 (Contig2918.g23227)


Aliases : Contig2918.g23227

Description : RCC1 and BTB domain-containing protein 2


Gene families : OG_01_0000734 (OrthoFinder) Phylogenetic Tree(s): OG0000734_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro473_g150070.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cre03.g144284 30786910 BTB/POZ and MATH domain-containing protein 2... 0.01 OrthoFinder
Dusal.1046s00001.1 33190565 Armadillo; BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_2291 2291 Hypothetical protein 0.01 OrthoFinder
UNPLg00364.t1 No alias Armadillo; BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
XM_002505331.1 MICPUN_63354, 63354 BTB/POZ domain [Interproscan]. 0.01 OrthoFinder
XM_002506475.1 MICPUN_66240, 66240 HEAT repeat; Armadillo; BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
XM_003059893.1 MicpuC2_40407, 40407 BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
XM_003063236.1 MicpuC2_29724, 29724 BTB/POZ domain; Armadillo [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001714.1_cds_GFH20874.1_15351 HaLaN_18074, GFH20874 BTB domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57227.1_9177 PRW57227 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR006652 Kelch_1 214 255
IPR006652 Kelch_1 473 505
IPR006652 Kelch_1 367 408
IPR000210 BTB/POZ_dom 524 628
IPR011705 BACK 636 678
No external refs found!