Sro468_g149250.1 (Contig3973.g30519)


Aliases : Contig3973.g30519

Description : Hypothetical protein


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro468_g149250.1
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241960.1 Contig673.g7891 Receptor ionotropic, NMDA 1 0.04 OrthoFinder
Sro1106_g241980.1 Contig673.g7893 Receptor ionotropic, NMDA 1 0.06 OrthoFinder
Sro1333_g263630.1 Contig3364.g26362 Receptor subunit 1 0.03 OrthoFinder
Sro1647_g288410.1 Contig41.g287 Glutamate-gated receptor that probably acts as non-... 0.04 OrthoFinder
Sro171_g075730.1 Contig113.g1282 Receptor subunit 1 0.05 OrthoFinder
Sro1777_g296910.1 Contig3318.g26032 Receptor subunit 1 0.05 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.1 OrthoFinder
Sro217_g089690.1 Contig1718.g15343 NMDA receptor subtype of glutamate-gated ion channels... 0.05 OrthoFinder
Sro224_g091510.1 Contig758.g8605 Receptor subunit 1 0.06 OrthoFinder
Sro2900_g339760.1 Contig1521.g13881 Receptor subunit 1 0.08 OrthoFinder
Sro412_g137970.1 Contig2922.g23269 Glutamate receptor, ionotropic 0.03 OrthoFinder
Sro468_g149240.1 Contig3973.g30518 Receptor subunit 1 0.03 OrthoFinder
Sro62_g035340.1 Contig2718.g21915 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro87_g045920.1 Contig2014.g17200 Receptor ionotropic, NMDA 1 0.04 OrthoFinder
Sro990_g228610.1 Contig427.g5785 Receptor ionotropic, NMDA 1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!