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  5. Sro439_g143190.1

Sro439_g143190.1 (Contig249.g3048)


Aliases : Contig249.g3048

Description : Sonic hedgehog protein


Gene families : OG_01_0001040 (OrthoFinder) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro439_g143190.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Sro1276_g258580.1 Contig1112.g10697 Hedgehog protein A 0.04 OrthoFinder
Sro183_g079550.1 Contig3056.g24300 Intercellular signal essential for a variety of... 0.04 OrthoFinder
Sro2631_g333180.1 Contig2273.g18837 Protein hedgehog 0.03 OrthoFinder
Sro76_g041820.1 Contig184.g2160 Peptidase, S8 (Subtilisin) family 0.04 OrthoFinder
Sro898_g217600.1 Contig2959.g23516 Desert hedgehog protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016540 protein autoprocessing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
InterPro domains Description Start Stop
IPR001767 Hedgehog_Hint 148 308
No external refs found!