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  5. Sro3494_g348610.1

Sro3494_g348610.1 (Contig3168.g25076)


Aliases : Contig3168.g25076

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3494_g348610.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Sro1067_g237390.1 Contig2309.g19054 Putative amino-acid ABC transporter-binding protein YhdW 0.07 OrthoFinder
Sro1292_g259960.1 Contig3668.g28337 Extracellular solute-binding protein 0.05 OrthoFinder
Sro1411_g270440.1 Contig2736.g22026 Extracellular solute-binding protein 0.05 OrthoFinder
Sro2307_g322760.1 Contig1768.g15637 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro2384_g325690.1 Contig2856.g22895 Extracellular solute-binding protein 0.03 OrthoFinder
Sro2718_g335420.1 Contig1422.g13112 Extracellular solute-binding protein 0.03 OrthoFinder
Sro441_g143660.1 Contig470.g6380 Extracellular solute-binding protein 0.05 OrthoFinder
Sro474_g150170.1 Contig2775.g22313 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro474_g150170.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro73_g040260.1 Contig3929.g30127 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro859_g211980.1 Contig1286.g12005 Extracellular solute-binding protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 317 519
No external refs found!