1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro348_g123290.1

Sro348_g123290.1 (Contig2346.g19295)


Aliases : Contig2346.g19295

Description : Transhydrogenase, mitochondrial


Gene families : OG_01_0000758 (OrthoFinder) Phylogenetic Tree(s): OG0000758_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro348_g123290.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Cre01.g054500 30788821 No description available 0.02 OrthoFinder
PTI_25G00420.1 No alias NADP transhydrogenase beta-like domain; Alanine... 0.04 OrthoFinder
SymbC1.scaffold21.167 21.167 Alanine dehydrogenase/pyridine nucleotide... 0.01 OrthoFinder
lcl|BLLF01003863.1_cds_GFH28406.1_22883 HaLaN_26888, GFH28406 NADP transhydrogenase beta-like domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01009645.1_cds_GFH33784.1_28261 HaLaN_33205, GFH33784 NAD(P) transhydrogenase subunit alpha 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58793.1_7154 PRW58793 NAD(P) mitochondrial isoform A 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58593.1_8105 PRW58593 NAD(P) mitochondrial isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR034300 PNTB-like 599 1050
IPR024605 NADP_transhyd_a_C 477 561
IPR007886 AlaDH/PNT_N 49 184
IPR007698 AlaDH/PNT_NAD(H)-bd 188 418
No external refs found!