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  5. Sro316_g115550.1

Sro316_g115550.1 (Contig2414.g19761)


Aliases : Contig2414.g19761

Description : Leptomycin B resistance protein pmd1


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro316_g115550.1
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000654.30 tig00000654_g2824.t1 ABC transporter B family member 25 OS=Oryza sativa... 0.01 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1135 1426
IPR011527 ABC1_TM_dom 51 299
IPR003439 ABC_transporter-like_ATP-bd 841 989
IPR003439 ABC_transporter-like_ATP-bd 519 669
No external refs found!