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  5. Sro3104_g343850.1

Sro3104_g343850.1 (Contig2425.g19841)


Aliases : Contig2425.g19841

Description : Colicin V secretion/processing ATP-binding protein CvaB


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3104_g343850.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Cre16.g692300 30777566 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cz02g34060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
EOD26441 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
SymbC1.scaffold16052.2 16052.2 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494946.1_3476 KAA8494946 Multidrug resistance protein 1B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 291 431
IPR003439 ABC_transporter-like_ATP-bd 642 795
No external refs found!