Sro2_g001730.1 (Contig467.g6331)


Aliases : Contig467.g6331

Description : Probable 18S rRNA (guanine-N(7))-methyltransferase


Gene families : OG_01_0001958 (OrthoFinder) Phylogenetic Tree(s): OG0001958_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2_g001730.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.133 tig00021127_g18813.t1 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
Cre09.g398104 30780603 RNA processing.RNA modification.rRNA/tRNA... 0.06 OrthoFinder
Dusal.0305s00004.1 33191322 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.01 OrthoFinder
EOD05571 No alias Methyltransferase type 11; 18S rRNA... 0.09 OrthoFinder
EOD19431 No alias Putative methyltransferase [Ensembl]. 0.02 OrthoFinder
OT_05G00380.1 No alias Methyltransferase domain 25; 18S rRNA... 0.08 OrthoFinder
PTI_22G02270.1 No alias 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.19 OrthoFinder
TP06G00730.1 No alias 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.19 OrthoFinder
Transcript_contig_54738 54738 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.01 OrthoFinder
XM_003055936.1 MicpuC2_55308, 55308 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
MF GO:0016435 rRNA (guanine) methyltransferase activity IEA Interproscan
BP GO:0070476 rRNA (guanine-N7)-methylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR022238 Bud23_C 240 316
IPR013216 Methyltransf_11 55 187
No external refs found!