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  5. Sro299_g111300.1

Sro299_g111300.1 (Contig1218.g11432)


Aliases : Contig1218.g11432

Description : Probable protease SohB


Gene families : OG_01_0000534 (OrthoFinder) Phylogenetic Tree(s): OG0000534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro299_g111300.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.54 tig00000663_g2987.t1 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder
Cre10.g444550 30790201, SPP1 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder
Cz07g30220.t1 No alias Peptidase S49 [Interproscan]. 0.06 OrthoFinder
Dusal.0664s00006.1 33189420 Peptidase S49 [Interproscan]. 0.03 OrthoFinder
EOD30496 No alias Peptidase S49; Peptidase S49, N-terminal proteobacteria... 0.07 OrthoFinder
PTI_23G00510.1 No alias Peptidase S49; Peptidase S49, N-terminal proteobacteria... 0.03 OrthoFinder
TP18G01890.1 No alias Peptidase S49; Peptidase S49, N-terminal proteobacteria... 0.01 OrthoFinder
Transcript_contig_54088 54088 Peptidase S49 [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001936.1_cds_GFH21945.1_16422 HaLaN_19335, GFH21945 Peptidase S49 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002030.1_cds_GFH22384.1_16861 HaLaN_19841, GFH22384 Peptidase S49 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0005886 plasma membrane IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013703 Peptidase_S49_N_proteobac 437 498
IPR002142 Peptidase_S49 501 643
No external refs found!