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  5. Sro295_g110530.1

Sro295_g110530.1 (Contig4342.g32776)


Aliases : Contig4342.g32776

Description : Gamma-aminobutyric acid (GABA) B receptor


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro295_g110530.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Sro119_g058070.1 Contig2194.g18280 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro1229_g254440.1 Contig3654.g28208 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro1521_g279510.1 Contig1605.g14555 Acid type B receptor subunit 1 0.03 OrthoFinder
Sro1624_g286700.1 Contig3628.g28050 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro1778_g296990.1 Contig1025.g10228 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro177_g077840.2 No alias GPCR family 3, C-terminal [Interproscan]. 0.04 OrthoFinder
Sro1_g000460.1 Contig3007.g23961 Acid type B receptor subunit 2 0.05 OrthoFinder
Sro768_g199680.1 Contig2130.g17973 Gamma-aminobutyric acid (GABA) B receptor 0.08 OrthoFinder
Sro768_g199680.2 No alias GPCR family 3, C-terminal [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 131 431
IPR017978 GPCR_3_C 525 797
No external refs found!