1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro293_g109820.1

Sro293_g109820.1 (Contig3203.g25303)


Aliases : Contig3203.g25303

Description : ATPase family AAA domain-containing protein 1


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro293_g109820.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.31 tig00000655_g2857.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000989.11 tig00000989_g6084.t1 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder
Dusal.0273s00012.1 33201816 ATPase, AAA-type, core; Vps4 oligomerisation, C-terminal... 0.01 OrthoFinder
Dusal.0318s00001.1 33185642 ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44343.1_2378 PRW44343 Vacuolar sorting-associated 4-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 223 354
IPR041569 AAA_lid_3 384 416
No external refs found!