1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2878_g339200.1

Sro2878_g339200.1 (Contig4091.g31275)


Aliases : Contig4091.g31275

Description : Gamma-aminobutyric acid (GABA) B receptor


Gene families : OG_01_0000512 (OrthoFinder) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2878_g339200.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Sro183_g079720.1 Contig3056.g24317 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro2781_g336940.1 Contig4651.g34625 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro282_g107380.1 Contig1420.g13081 Hypothetical protein 0.05 OrthoFinder
Sro282_g107390.1 Contig1420.g13082 GPCR family 3, C-terminal [Interproscan]. 0.03 OrthoFinder
Sro282_g107400.1 Contig1420.g13083 Hypothetical protein 0.04 OrthoFinder
Sro282_g107410.1 Contig1420.g13084 GPCR family 3, C-terminal [Interproscan]. 0.03 OrthoFinder
Sro353_g124450.1 Contig1923.g16579 Receptor-type guanylate cyclase gcy 0.03 OrthoFinder
Sro50_g029180.1 Contig297.g3906 Receptor-type guanylate cyclase gcy 0.03 OrthoFinder
Sro660_g182960.1 Contig1196.g11301 Receptor-type guanylate cyclase gcy 0.06 OrthoFinder
Sro684_g186780.1 Contig2085.g17782 Receptor-type guanylate cyclase gcy 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 548 789
No external refs found!