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  5. Sro2276_g321640.1

Sro2276_g321640.1 (Contig3282.g25808)


Aliases : Contig3282.g25808

Description : Sec1 family domain-containing protein 1


Gene families : OG_01_0003830 (OrthoFinder) Phylogenetic Tree(s): OG0003830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2276_g321640.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre12.g521350 30792127, SLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cz10g22040.t1 No alias Sec1-like protein [Interproscan]. 0.04 OrthoFinder
OT_06G04250.1 No alias Sec1-like protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56694 56694 Sec1-like protein [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0102.1 32897585 Sec1-like protein [Interproscan]. 0.02 OrthoFinder
XM_002499780.1 MICPUN_96913, 96913 Sec1-like protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000293.1_cds_GFH10185.1_4662 HaLaN_05454, GFH10185 SEC1 family transport protein SLY1 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45270.1_1699 PRW45270 SEC1 family transport SLY1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR001619 Sec1-like 48 647
No external refs found!