Sro1898_g304120.1 (Contig1148.g10961)

Aliases : Contig1148.g10961

Description : Polymerase II subunit RPB7

Gene families : OG_01_0003541 (OrthoFinder) Phylogenetic Tree(s): OG0003541_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1898_g304120.1
Cluster	HCCA: Cluster_321

Target	Alias	Description	ECC score	Gene Family Method	Actions
XM_002500145.1	MICPUN_78358, 78358	RNA polymerase Rpb7-like , N-terminal; S1 domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003697	single-stranded DNA binding	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0006839	mitochondrial transport	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0006952	defense response	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008276	protein methyltransferase activity	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Enrichment
BP	GO:0009966	regulation of signal transduction	IEP	Enrichment
BP	GO:0010646	regulation of cell communication	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Enrichment
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Enrichment
BP	GO:0023051	regulation of signaling	IEP	Enrichment
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Enrichment
BP	GO:0032006	regulation of TOR signaling	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
MF	GO:0042054	histone methyltransferase activity	IEP	Enrichment
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Enrichment
BP	GO:0070585	protein localization to mitochondrion	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0071806	protein transmembrane transport	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Enrichment
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Enrichment
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Enrichment
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005576	Rpb7-like_N	35	100
IPR003029	S1_domain	104	178

External Links

No external refs found!

Sro1898_g304120.1 (Contig1148.g10961)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation