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Aliases : Contig2251.g18664
Description : Nucleolar ribonucleoprotein protein IMP3
Gene families : OG_01_0002993 (OrthoFinder) Phylogenetic Tree(s): OG0002993_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1782_g297190.1 | |
| Cluster | HCCA: Cluster_242 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g170750 | 30786644, RNP3 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder | |
| EOD15703 | No alias | Ribosomal protein S4/S9, N-terminal; RNA-binding S4... | 0.04 | OrthoFinder | |
| Sro2345_g324170.1 | Contig3817.g29314 | Nucleolar ribonucleoprotein protein IMP3 | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0019843 | rRNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004514 | nicotinate-nucleotide diphosphorylase (carboxylating) activity | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0018580 | nitronate monooxygenase activity | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0030686 | 90S preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |