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  5. Sro1777_g296940.1

Sro1777_g296940.1 (Contig3318.g26035)


Aliases : Contig3318.g26035

Description : Receptor ionotropic, NMDA 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1777_g296940.1
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241960.1 Contig673.g7891 Receptor ionotropic, NMDA 1 0.07 OrthoFinder
Sro1106_g241980.1 Contig673.g7893 Receptor ionotropic, NMDA 1 0.06 OrthoFinder
Sro1418_g271020.1 Contig4752.g35218 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro171_g075730.1 Contig113.g1282 Receptor subunit 1 0.03 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.06 OrthoFinder
Sro224_g091510.1 Contig758.g8605 Receptor subunit 1 0.03 OrthoFinder
Sro2288_g322060.1 Contig4716.g35057 Hypothetical protein 0.03 OrthoFinder
Sro2372_g325250.1 Contig4676.g34743 Receptor subunit 1 0.03 OrthoFinder
Sro2372_g325260.1 Contig4676.g34744 Receptor subunit 1 0.03 OrthoFinder
Sro2900_g339760.1 Contig1521.g13881 Receptor subunit 1 0.04 OrthoFinder
Sro468_g149240.1 Contig3973.g30518 Receptor subunit 1 0.04 OrthoFinder
Sro557_g166130.1 Contig1427.g13183 Receptor subunit 1 0.05 OrthoFinder
Sro62_g035340.1 Contig2718.g21915 Ionotropic glutamate receptor [Interproscan]. 0.04 OrthoFinder
Sro87_g045920.1 Contig2014.g17200 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.03 OrthoFinder
Sro990_g228610.1 Contig427.g5785 Receptor ionotropic, NMDA 1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 195 495
No external refs found!