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  5. Sro1705_g292400.1

Sro1705_g292400.1 (Contig4149.g31668)


Aliases : Contig4149.g31668

Description : Hypothetical protein


Gene families : OG_01_0001328 (OrthoFinder) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1705_g292400.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000498.35 tig00000498_g1611.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001086.11 tig00001086_g6846.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020629.120 tig00020629_g12446.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Sro1060_g236670.1 Contig1660.g14960 Sensor kinase/phosphatase LuxQ 0.02 OrthoFinder
Sro112_g055500.1 Contig1575.g14275 Sensor kinase/phosphatase LuxQ 0.05 OrthoFinder
Sro2335_g323820.1 Contig3717.g28592 Autoinducer 1 sensor kinase/phosphatase LuxN 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!