1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1579_g283740.1

Sro1579_g283740.1 (Contig3855.g29675)


Aliases : Contig3855.g29675

Description : Acid type B receptor subunit 2


Gene families : OG_01_0005155 (OrthoFinder) Phylogenetic Tree(s): OG0005155_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1579_g283740.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Sro1081_g239120.1 Contig4556.g34030 Acid type B receptor subunit 2 0.03 OrthoFinder
Sro1102_g241520.1 Contig3075.g24529 Acid type B receptor subunit 2 0.04 OrthoFinder
Sro225_g091810.1 Contig1661.g14979 Acid type B receptor subunit 2 0.03 OrthoFinder
Sro4045_g352660.1 Contig2319.g19151 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro591_g171990.1 Contig3321.g26070 Metabotropic glutamate receptor-like protein 0.03 OrthoFinder
Sro921_g220340.1 Contig435.g5866 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 137 497
IPR017978 GPCR_3_C 568 813
No external refs found!